Proteomic tools to decipher microbial community structure and functioning.
Fiche publication
Date publication
septembre 2015
Journal
Environmental science and pollution research international
Auteurs
Membres identifiés du Cancéropôle Est :
Dr CARAPITO Christine
Tous les auteurs :
Arsène-Ploetze F, Bertin PN, Carapito C
Lien Pubmed
Résumé
Recent advances in microbial ecology allow studying microorganisms in their environment, without laboratory cultivation, in order to get access to the large uncultivable microbial community. With this aim, environmental proteomics has emerged as an appropriate complementary approach to metagenomics providing information on key players that carry out main metabolic functions and addressing the adaptation capacities of living organisms in situ. In this review, a wide range of proteomic approaches applied to investigate the structure and functioning of microbial communities as well as recent examples of such studies are presented.
Mots clés
Animals, Bacterial Proteins, metabolism, Environmental Microbiology, Humans, Metagenomics, Microbial Interactions, Microbiota, Proteome, metabolism, Proteomics
Référence
Environ Sci Pollut Res Int. 2015 Sep;22(18):13599-612