Fiche publication


Date publication

janvier 2025

Journal

Nature communications

Auteurs

Membres identifiés du Cancéropôle Est :
Dr COIN Frédéric , Dr DAVIDSON Irwin , Dr EGLY Jean-Marc , Dr COMPE Emmanuel


Tous les auteurs :
Cigrang M, Obid J, Nogaret M, Seno L, Ye T, Davidson G, Catez P, Berico P, Capelli C, Marechal C, Zachayus A, Elly C, Guillen Navarro MJ, Martinez Diez M, Santamaria Nunez G, Li TK, Compe E, Avilés P, Davidson I, Egly JM, Cuevas C, Coin F

Résumé

The plasticity of cancer cells facilitates their ability to adopt heterogeneous differentiation states, posing a significant challenge to therapeutic interventions. Specific gene expression programs, driven in part by super-enhancers (SEs), underlie cancer cell states. Here we successfully inhibit SE-driven transcription in phenotypically distinct metastatic melanoma cells using next-generation synthetic ecteinascidins. Through functional genomic methodologies, we demonstrate that these compounds inhibit the expression of genes encoding lineage-specific or ubiquitous transcription factors/coactivators by selectively targeting the CpG-rich sequences within their promoters and/or enhancers. This prevents the formation of transcription factor/coactivator condensates necessary for SE-dependent gene expression. Consequently, these compounds exhibit cytotoxic activity across distinct subpopulations of metastatic melanoma cells and inhibit tumor proliferation, including those resistant to current therapies. These findings extend to other cancers, like small cell lung cancer, recently approved for ecteinascidin-based treatment. Overall, our study provides preclinical proof that pan-inhibition of SE-dependent genes with synthetic ecteinascidins is a promising therapeutic approach for tumors with heterogeneous transcriptional landscapes.

Mots clés

Humans, Cell Line, Tumor, Enhancer Elements, Genetic, genetics, Gene Expression Regulation, Neoplastic, drug effects, Antineoplastic Agents, pharmacology, Animals, Melanoma, drug therapy, Transcription, Genetic, drug effects, Mice, Cell Proliferation, drug effects, Transcription Factors, metabolism, Promoter Regions, Genetic, genetics, Xenograft Model Antitumor Assays

Référence

Nat Commun. 2025 01 8;16(1):512